Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015903429.1_cds_XP_016453486.1_47601
CDS Infomation

[gene=LOC107777849] [db_xref=GeneID:107777849] [protein=transcription initiation factor IIF subunit alpha-like] [protein_id=XP_016453486.1] [location=complement(join(42924..42936,43045..43133,43373..43579,43884..43981,44348..44781,44892..45037,46532..46687,49283..49453))] [gbkey=CDS]
Sequence

ATGTCGATAGATTTGGTACTGAAACCGTCGTGTAGCAGGTGCGGCTCCACGTCGGAGTTG
TACGGAAGCACCTGCAAGCACTTGACTCTTTGCATGTCTTGTGGTAAAAACATGGCTGAG
ACTCGTGATAAATGCTACGAGTGTGGCACTCCGATCACACGGCTGATTCGAGAGTATAAT
GTTCGGGCTTGCTCCAGCAATGACAAGAATTATTTCATTGCTCGATTTGCTTCAGGCTTA
CCGAACTTTTCAAAAAAAAAGAATGAGAGTAAATGGACTTTACAAAAAGAAGGTTTGCAA
GGACGTCAAGTTACGGATACTTTGCGGGAAAAGTACAAGAATAAACCGTGGCTATTAGAG
GATGAAACCGGTCAATTTCAGTTCCATGGTCAGCTTGAGGGAGCACAGTCTGCACAATAT
TATCTATTGATGATGCAGGGTGAAGAGTTGGTTGCTATTCCAGCTGGTTCTTGGTACAAC
TTCAACAAAGTTGCCCAATATAAGCAACTTACTCTGGAGGAAGCAGAGGAGAAAATGAAA
AATAGAAGGAAAACTGCAGATGGGTACCAGAGATGGATGATGAAAGCAGCAAATAATGGA
CCTGCTGCCTTCGGTGAAGTAGAAAGATTTGATGACAAGGAAAGTGGATCTGGTGGGACA
AGGGGGCGTAAGAAAACTTCTGGTGATGAGGACGAAGGCAACGGTTCGGACCATGGGGAT
GAAGATGAGGAAGAGGAGGCTGCTAGAAAAAGCAGGTTGGGACTCAACAAAAGAGGCGCT
GATGATGATGAAGAGGGTCCTAGAGGGGGTGATCTTGACCTGGATGATGATGATATTGAA
AAAGGTCAGTCTTTCTTCTTCCTAGAATGCCTTGCATTGCACATTCGAGATTGCTTCCCA
ACTATTTCTTTTGTTTTCAANTCAGCTAAGACTAAAAGAAAAGCTAATGGTGATGACTCA
AAACCAACCAATGGTGCTCCCTTGAAAAAAGTGAAAACAGAAACGGATGCCAAACCTGGG
AAAGATGAAACTCCGTCTACTGCGAAGAACAGTGTTCTCCCAAAGGGTGCATCACCCTCT
TCCAAAACGGCTCCAAGTCCTGCCACAGGTCCTGTTACTGAAGAAGAAATTAGAGCTGTT
CTATTGCAGAGAAAACCAGTGACCACACAGGATCTTGTCAGCCAATTTAAATCTCGTTTA
AAATGTAAAGAGGATAAGGCTGCTTTTGCTGATGTATTGAGGAAGATCTCCAAGATACAG
AAGACCGGTACAGGAACGAGCTATGTTGTGTTACGAGAGAGGACAAATCAATAG

Peptide Sequence

PEP ID

XP_016453486.1
PEP Infomation

PREDICTED: transcription initiation factor IIF subunit alpha-like [Nicotiana tabacum]
Sequence

MSIDLVLKPSCSRCGSTSELYGSTCKHLTLCMSCGKNMAETRDKCYECGTPITRLIREYN
VRACSSNDKNYFIARFASGLPNFSKKKNESKWTLQKEGLQGRQVTDTLREKYKNKPWLLE
DETGQFQFHGQLEGAQSAQYYLLMMQGEELVAIPAGSWYNFNKVAQYKQLTLEEAEEKMK
NRRKTADGYQRWMMKAANNGPAAFGEVERFDDKESGSGGTRGRKKTSGDEDEGNGSDHGD
EDEEEEAARKSRLGLNKRGADDDEEGPRGGDLDLDDDDIEKGQSFFFLECLALHIRDCFP
TISFVFXSAKTKRKANGDDSKPTNGAPLKKVKTETDAKPGKDETPSTAKNSVLPKGASPS
SKTAPSPATGPVTEEEIRAVLLQRKPVTTQDLVSQFKSRLKCKEDKAAFADVLRKISKIQ
KTGTGTSYVVLRERTNQ

Transcript Sequence

Gene sequence data has not been registered.